What do Lung Cancer, Ovarian Cancer, Breast Cancer and Colon Cancer have in common?
June 29, 2009
Common Proteins:
ABCB1, AKT1, AKT2, AKT3, ALDH1A1, AURKA, BCL2, BIRC5, CASP1, CASP3, CASP7, CASP8, CASP9, CCL2, CCND1, CCNE1, CD274, CD40, CD40LG, CD82, CD8A, CDH1, CDKN1A, CDKN1B, CDKN2A, CEACAM5, CTNNB1, CXCR4, DAG1, EGF, EGFR, EPHA2, ERBB2, ESR1, ESR2, FN1, FRAP1, GSTM1, HDAC1, HIF1A, HSPA5, IFNG, IGF1, IGF1R, IL1B, IL2, IL8, ITGB1, JUN, KRAS, KRT20, LEFTY2, LEP, MAP2K1, MAPK1, MAPK10, MAPK11, MAPK14, MAPK3, MAPK8, MAPK9, MKI67, MMP1, MMP13, MMP14, MMP2, MMP9, MUC1, MYC, NFKB1, NFKB2, PIK3C3, PIK3CA, PIK3CG, PIK3R1, PIK3R2, PLAU, PLAUR, PTEN, PTGS2, PTK2, PTK2B, RB1, REL, RELA, RELB, SCGB2A2, SRC, STAT3, STK11, TERT, TGFB1, TGFB2, TGFB3, TNF, TNFRSF10B, TNFSF10, TP53, TYMS, VEGFA, VEGFB, VEGFC, VIM
Common Processes:
angiogenesis, anti-apoptosis, apoptosis, autophagy, cell adhesion, cell cycle, cell cycle arrest, cell death, cell differentiation, cell growth, cell migration, cell proliferation, DNA Methylation, drug resistance, epithelial to mesenchymal transition, gene expression, gene silencing, growth, lymphangiogenesis, metabolism, methylation, negative regulation of cell growth, negative regulation of cell proliferation, response to hypoxia, response to oxidative stress, RNA interference, signal transduction
Common Drugs:
Cetuximab, Cisplatin, Doxorubicin, Etoposide, Fluorouracil, Gefitinib, Paclitaxel
Common Diseases:
Carcinoma, Hepatocellular; Carcinoma, Lewis Lung; Carcinoma, Renal Cell; Colorectal Neoplasms; Esophageal Neoplasms; Glioblastoma; Head and Neck Neoplasms; Inflammation; Kidney Neoplasms; Leukemia; Liver Neoplasms; Melanoma; Neoplasm Metastasis; Neuroectodermal Tumors; Osteosarcoma; Pancreatic Neoplasms; Prostatic Neoplasms; Skin Neoplasms; Stomach Neoplasms; Thyroid Neoplasms; Uterine Cervical Neoplasms; Uterine Neoplasms
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Entry Filed under: text mining. Tags: abstraction, abstracts, accurate data, biological process, biomedical literature, categorization, colloborations, curate, curation, data accuracy, data alerts, data analysis, diseases, drug discovery, drugs, free, genes, indexing, manual annotation, manual curation, MeSH, molecules, natural language processing, NLP, precision, processes, protein function, proteins, publishing, pubmed, query, recall, tag, text mining, visualization, web 2.0.
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mike steward | July 11, 2009 at 5:40 am
Sounds amazing.,.. this is the kinda of thing that will answer my research needs very quickly… Can you guys quickly generate something similar for drugs…